Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 AL162430.1-201ENST00000480705 870 ntBASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 AC068587.7-201ENST00000641602 218 ntBASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 AC010141.3-201ENST00000456659 717 ntBASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 CLDN5-201ENST00000403084 2357 ntBASIC19.79■□□□□ 0.76
RPH3AQ9Y2J0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPH3AQ9Y2J0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPH3AQ9Y2J0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.77■□□□□ 0.75
RPH3AQ9Y2J0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RPH3AQ9Y2J0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RPH3AQ9Y2J0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 MIR572-201ENST00000384983 95 ntBASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 AC087623.3-201ENST00000607047 1098 ntBASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RPH3AQ9Y2J0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPH3AQ9Y2J0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 MIR6084-201ENST00000622012 110 ntBASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 AC233723.2-201ENST00000623798 2106 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms