Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MIR572-201ENST00000384983 95 ntBASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 AC004911.1-201ENST00000416316 871 ntBASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 AC012414.1-201ENST00000556676 535 ntBASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
FNDC3AQ9Y2H6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.08■■□□□ 1.12
FNDC3AQ9Y2H6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FNDC3AQ9Y2H6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
FNDC3AQ9Y2H6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
FNDC3AQ9Y2H6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FNDC3AQ9Y2H6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 AL499627.2-201ENST00000606283 725 ntBASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3AQ9Y2H6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
FNDC3AQ9Y2H6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 CCDC92B-201ENST00000575506 885 ntBASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
FNDC3AQ9Y2H6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 AL354811.1-201ENST00000610286 706 ntBASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.04■■□□□ 1.12
FNDC3AQ9Y2H6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
FNDC3AQ9Y2H6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.02■■□□□ 1.12
FNDC3AQ9Y2H6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.01■■□□□ 1.11
FNDC3AQ9Y2H6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms