Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC137767.1-201ENST00000602918 1920 ntBASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 LINC00526-201ENST00000581067 1875 ntBASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.32■■□□□ 1.32
UBQLN1Q9UMX0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 AC009237.3-201ENST00000393279 1427 ntBASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
UBQLN1Q9UMX0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 AC092666.2-201ENST00000613287 246 ntBASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
UBQLN1Q9UMX0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
UBQLN1Q9UMX0 ESRRAP2-201ENST00000418437 1549 ntBASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 NTF6G-201ENST00000591094 616 ntBASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 AC005224.4-201ENST00000583262 1652 ntBASIC23.28■■□□□ 1.32
UBQLN1Q9UMX0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 C9orf163-202ENST00000624034 2573 ntBASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBQLN1Q9UMX0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UBQLN1Q9UMX0 AP004607.7-201ENST00000527152 1677 ntBASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms