Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 BX842568.3-201ENST00000418104 571 ntBASIC21.87■■□□□ 1.09
APPL1Q9UKG1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 AC233992.3-201ENST00000607491 485 ntBASIC21.87■■□□□ 1.09
APPL1Q9UKG1 MIR6821-201ENST00000617625 74 ntBASIC21.87■■□□□ 1.09
APPL1Q9UKG1 AC068587.7-201ENST00000641602 218 ntBASIC21.87■■□□□ 1.09
APPL1Q9UKG1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
APPL1Q9UKG1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 AC233723.2-201ENST00000623798 2106 ntBASIC21.86■■□□□ 1.09
APPL1Q9UKG1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
APPL1Q9UKG1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 AL031602.1-201ENST00000633169 911 ntBASIC21.85■■□□□ 1.09
APPL1Q9UKG1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
APPL1Q9UKG1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 IRS3P-201ENST00000223076 1006 ntBASIC21.84■■□□□ 1.09
APPL1Q9UKG1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 AC097381.1-201ENST00000429019 1296 ntBASIC21.84■■□□□ 1.09
APPL1Q9UKG1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
APPL1Q9UKG1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.83■■□□□ 1.09
APPL1Q9UKG1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
APPL1Q9UKG1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
APPL1Q9UKG1 AC087742.1-201ENST00000575880 1738 ntBASIC21.83■■□□□ 1.08
APPL1Q9UKG1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
APPL1Q9UKG1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.82■■□□□ 1.08
APPL1Q9UKG1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 AC092666.2-201ENST00000613287 246 ntBASIC21.82■■□□□ 1.08
APPL1Q9UKG1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
APPL1Q9UKG1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 AC010525.1-201ENST00000585559 441 ntBASIC21.81■■□□□ 1.08
APPL1Q9UKG1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 AC127496.7-201ENST00000625110 1798 ntBASIC21.81■■□□□ 1.08
APPL1Q9UKG1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APPL1Q9UKG1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APPL1Q9UKG1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms