Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 AC010525.1-201ENST00000585559 441 ntBASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 AC106739.1-201ENST00000617035 715 ntBASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 AC110285.6-201ENST00000617652 491 ntBASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 AC068587.7-201ENST00000641602 218 ntBASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA9Q9UGM1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 CA15P2-201ENST00000611168 834 ntBASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA9Q9UGM1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.77■□□□□ 0.75
CHRNA9Q9UGM1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA9Q9UGM1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA9Q9UGM1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 BX842568.3-201ENST00000418104 571 ntBASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA9Q9UGM1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 AL139246.5-201ENST00000606645 996 ntBASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 AC087239.1-201ENST00000622671 572 ntBASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA9Q9UGM1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA9Q9UGM1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 EDA-201ENST00000338901 1233 ntBASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 AC233992.3-201ENST00000607491 485 ntBASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA9Q9UGM1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms