Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 AL117332.1-201ENST00000622628 974 ntBASIC19.55■□□□□ 0.72
HINT3Q9NQE9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HINT3Q9NQE9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HINT3Q9NQE9 AC244015.2-201ENST00000616358 1861 ntBASIC19.54■□□□□ 0.72
HINT3Q9NQE9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 AC005229.4-201ENST00000610085 2198 ntBASIC19.53■□□□□ 0.72
HINT3Q9NQE9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 MIR3621-201ENST00000580529 85 ntBASIC19.53■□□□□ 0.72
HINT3Q9NQE9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HINT3Q9NQE9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 C17orf82-201ENST00000623772 1530 ntBASIC19.52■□□□□ 0.72
HINT3Q9NQE9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HINT3Q9NQE9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.52■□□□□ 0.71
HINT3Q9NQE9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HINT3Q9NQE9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.51■□□□□ 0.71
HINT3Q9NQE9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.51■□□□□ 0.71
HINT3Q9NQE9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HINT3Q9NQE9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms