Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 SLC25A24-204ENST00000569674 2357 ntBASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC52A3Q9NQ40 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC52A3Q9NQ40 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC52A3Q9NQ40 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC52A3Q9NQ40 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC52A3Q9NQ40 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC52A3Q9NQ40 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC52A3Q9NQ40 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC52A3Q9NQ40 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC52A3Q9NQ40 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 AC073130.3-201ENST00000624389 2278 ntBASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 Z92544.1-202ENST00000571933 1220 ntBASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC52A3Q9NQ40 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 AC079089.2-201ENST00000531211 1277 ntBASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC52A3Q9NQ40 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 MTDHP2-201ENST00000601468 714 ntBASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC52A3Q9NQ40 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 MIR4787-201ENST00000607364 84 ntBASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC52A3Q9NQ40 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms