Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 KRT18P20-201ENST00000548986 1279 ntBASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 AL353803.4-201ENST00000565882 1934 ntBASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
ZFYVE28Q9HCC9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.02■■□□□ 1.6
ZFYVE28Q9HCC9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 MIPEPP3-201ENST00000412105 444 ntBASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 AP006294.2-201ENST00000641667 209 ntBASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZFYVE28Q9HCC9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 PPP1R14BP2-201ENST00000426284 444 ntBASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25■■□□□ 1.59
ZFYVE28Q9HCC9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 AC010141.2-201ENST00000452426 721 ntBASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 RPS2P52-201ENST00000469610 820 ntBASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 AC013268.1-206ENST00000638368 961 ntBASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 AC112229.1-201ENST00000639295 961 ntBASIC24.99■■□□□ 1.59
ZFYVE28Q9HCC9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 MKRN4P-201ENST00000444706 1521 ntBASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZFYVE28Q9HCC9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 AC138907.5-202ENST00000569484 235 ntBASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.97■■□□□ 1.59
ZFYVE28Q9HCC9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 SLC7A5P1-201ENST00000568957 537 ntBASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZFYVE28Q9HCC9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.95■■□□□ 1.59
ZFYVE28Q9HCC9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
ZFYVE28Q9HCC9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
ZFYVE28Q9HCC9 AC055733.4-201ENST00000638462 1354 ntBASIC24.95■■□□□ 1.59
ZFYVE28Q9HCC9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 DUSP5P2-201ENST00000426873 1033 ntBASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 TERF1P5-201ENST00000477545 1207 ntBASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.95■■□□□ 1.58
ZFYVE28Q9HCC9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms