Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RPAP3Q9H6T3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.14■■□□□ 1.62
RPAP3Q9H6T3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
RPAP3Q9H6T3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RPAP3Q9H6T3 AC006970.2-201ENST00000450065 779 ntBASIC25.14■■□□□ 1.62
RPAP3Q9H6T3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.14■■□□□ 1.62
RPAP3Q9H6T3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.14■■□□□ 1.62
RPAP3Q9H6T3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RPAP3Q9H6T3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.13■■□□□ 1.61
RPAP3Q9H6T3 LINC01960-201ENST00000563759 1884 ntBASIC25.13■■□□□ 1.61
RPAP3Q9H6T3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.13■■□□□ 1.61
RPAP3Q9H6T3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 AC104771.1-201ENST00000603335 964 ntBASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RPAP3Q9H6T3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 MFSD11-216ENST00000590393 1141 ntBASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.11■■□□□ 1.61
RPAP3Q9H6T3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 AC079089.2-201ENST00000531211 1277 ntBASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP3Q9H6T3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 DUSP8P5-201ENST00000422884 1815 ntBASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 MIR663A-201ENST00000385250 93 ntBASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.09■■□□□ 1.61
RPAP3Q9H6T3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP3Q9H6T3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP3Q9H6T3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.08■■□□□ 1.61
RPAP3Q9H6T3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP3Q9H6T3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 AL109923.1-201ENST00000618799 583 ntBASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP3Q9H6T3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 AC055733.4-201ENST00000638462 1354 ntBASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 NCF1B-203ENST00000435988 1254 ntBASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP3Q9H6T3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP3Q9H6T3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.05■■□□□ 1.6
RPAP3Q9H6T3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP3Q9H6T3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RPAP3Q9H6T3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP3Q9H6T3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms