Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNX25Q9H3E2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 OR7E47P-201ENST00000546390 1422 ntBASIC23.11■■□□□ 1.29
SNX25Q9H3E2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 BX005040.4-201ENST00000637145 1518 ntBASIC23.11■■□□□ 1.29
SNX25Q9H3E2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNX25Q9H3E2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 AC137767.1-201ENST00000602918 1920 ntBASIC23.1■■□□□ 1.29
SNX25Q9H3E2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 AC123595.1-201ENST00000440769 1046 ntBASIC23.1■■□□□ 1.29
SNX25Q9H3E2 AC087623.3-201ENST00000607047 1098 ntBASIC23.1■■□□□ 1.29
SNX25Q9H3E2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNX25Q9H3E2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNX25Q9H3E2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SNX25Q9H3E2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.08■■□□□ 1.28
SNX25Q9H3E2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.08■■□□□ 1.28
SNX25Q9H3E2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SNX25Q9H3E2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SNX25Q9H3E2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.08■■□□□ 1.28
SNX25Q9H3E2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 LINC00526-201ENST00000581067 1875 ntBASIC23.07■■□□□ 1.28
SNX25Q9H3E2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 LINC02228-203ENST00000641970 1355 ntBASIC23.07■■□□□ 1.28
SNX25Q9H3E2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 MIR5787-201ENST00000611784 55 ntBASIC23.07■■□□□ 1.28
SNX25Q9H3E2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNX25Q9H3E2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.06■■□□□ 1.28
SNX25Q9H3E2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms