Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 CA15P2-201ENST00000611168 834 ntBASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 AC131212.1-201ENST00000613771 668 ntBASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 AC137767.1-201ENST00000602918 1920 ntBASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CCDC68Q9H2F9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC68Q9H2F9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC68Q9H2F9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 AL138724.1-201ENST00000606771 1088 ntBASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC68Q9H2F9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC68Q9H2F9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 AL136116.3-201ENST00000402907 1138 ntBASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 OR2I1P-207ENST00000453522 948 ntBASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 AC068587.7-201ENST00000641602 218 ntBASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC68Q9H2F9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 SERBP1P1-201ENST00000396021 1160 ntBASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 AC087239.1-201ENST00000622671 572 ntBASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 AL031602.1-201ENST00000633169 911 ntBASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC68Q9H2F9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 C11orf96-202ENST00000528572 1834 ntBASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 LINC00565-201ENST00000562710 2331 ntBASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC68Q9H2F9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms