Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.58■■□□□ 1.36
CDT1Q9H211 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
CDT1Q9H211 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDT1Q9H211 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
CDT1Q9H211 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDT1Q9H211 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDT1Q9H211 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.57■■□□□ 1.36
CDT1Q9H211 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.57■■□□□ 1.36
CDT1Q9H211 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDT1Q9H211 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.57■■□□□ 1.36
CDT1Q9H211 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDT1Q9H211 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDT1Q9H211 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDT1Q9H211 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 OR7E47P-201ENST00000546390 1422 ntBASIC23.56■■□□□ 1.36
CDT1Q9H211 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDT1Q9H211 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDT1Q9H211 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.56■■□□□ 1.36
CDT1Q9H211 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.56■■□□□ 1.36
CDT1Q9H211 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CDT1Q9H211 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.55■■□□□ 1.36
CDT1Q9H211 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.55■■□□□ 1.36
CDT1Q9H211 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.55■■□□□ 1.36
CDT1Q9H211 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 KRT18P5-201ENST00000436075 1291 ntBASIC23.55■■□□□ 1.36
CDT1Q9H211 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDT1Q9H211 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.55■■□□□ 1.36
CDT1Q9H211 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDT1Q9H211 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDT1Q9H211 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.54■■□□□ 1.36
CDT1Q9H211 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.54■■□□□ 1.36
CDT1Q9H211 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CDT1Q9H211 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.54■■□□□ 1.36
CDT1Q9H211 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.54■■□□□ 1.36
CDT1Q9H211 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDT1Q9H211 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.54■■□□□ 1.36
CDT1Q9H211 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.54■■□□□ 1.36
CDT1Q9H211 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CDT1Q9H211 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDT1Q9H211 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDT1Q9H211 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.54■■□□□ 1.36
CDT1Q9H211 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CDT1Q9H211 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.53■■□□□ 1.36
CDT1Q9H211 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
CDT1Q9H211 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CDT1Q9H211 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.53■■□□□ 1.36
CDT1Q9H211 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.53■■□□□ 1.36
CDT1Q9H211 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDT1Q9H211 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.53■■□□□ 1.36
CDT1Q9H211 ESRRAP2-201ENST00000418437 1549 ntBASIC23.53■■□□□ 1.36
CDT1Q9H211 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.53■■□□□ 1.36
CDT1Q9H211 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CDT1Q9H211 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.52■■□□□ 1.36
CDT1Q9H211 AC139530.1-201ENST00000575312 1977 ntBASIC23.52■■□□□ 1.36
CDT1Q9H211 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDT1Q9H211 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDT1Q9H211 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDT1Q9H211 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDT1Q9H211 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.52■■□□□ 1.36
CDT1Q9H211 AC104564.3-201ENST00000582367 638 ntBASIC23.52■■□□□ 1.36
CDT1Q9H211 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.52■■□□□ 1.36
CDT1Q9H211 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDT1Q9H211 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDT1Q9H211 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.35
CDT1Q9H211 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.51■■□□□ 1.35
CDT1Q9H211 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDT1Q9H211 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.51■■□□□ 1.35
CDT1Q9H211 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDT1Q9H211 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.51■■□□□ 1.35
CDT1Q9H211 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.51■■□□□ 1.35
CDT1Q9H211 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.51■■□□□ 1.35
CDT1Q9H211 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDT1Q9H211 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms