Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.48■■□□□ 1.35
NUCKS1Q9H1E3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.47■■□□□ 1.35
NUCKS1Q9H1E3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
NUCKS1Q9H1E3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NUCKS1Q9H1E3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.45■■□□□ 1.35
NUCKS1Q9H1E3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
NUCKS1Q9H1E3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
NUCKS1Q9H1E3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 FAM99A-202ENST00000538190 1989 ntBASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.45■■□□□ 1.34
NUCKS1Q9H1E3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NUCKS1Q9H1E3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 AC244015.2-201ENST00000616358 1861 ntBASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
NUCKS1Q9H1E3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 AL031602.1-201ENST00000633169 911 ntBASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
NUCKS1Q9H1E3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.41■■□□□ 1.34
NUCKS1Q9H1E3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms