Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 AC097658.1-201ENST00000475555 843 ntBASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 Z99916.2-201ENST00000604037 246 ntBASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
CNTNAP3Q9BZ76 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3Q9BZ76 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 AC133561.5-201ENST00000635547 218 ntBASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 MYC-209ENST00000641252 345 ntBASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP3Q9BZ76 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 FAM197Y4-202ENST00000622692 608 ntBASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.74■□□□□ 0.91
CNTNAP3Q9BZ76 AC145676.1-201ENST00000514988 2004 ntBASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3Q9BZ76 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP3Q9BZ76 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 PRKY-204ENST00000533551 1019 ntBASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP3Q9BZ76 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CNTNAP3Q9BZ76 AP003097.1-201ENST00000530657 1135 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms