Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAIPQ9BWF2 ANOS2P-203ENST00000472227 1816 ntBASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 KRT18P61-201ENST00000585825 1298 ntBASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
TRAIPQ9BWF2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 AC090192.1-201ENST00000517740 490 ntBASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAIPQ9BWF2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TRAIPQ9BWF2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAIPQ9BWF2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAIPQ9BWF2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAIPQ9BWF2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAIPQ9BWF2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAIPQ9BWF2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAIPQ9BWF2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAIPQ9BWF2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.73■■□□□ 1.39
TRAIPQ9BWF2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAIPQ9BWF2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAIPQ9BWF2 AC079834.2-201ENST00000609776 1949 ntBASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 C9orf163-202ENST00000624034 2573 ntBASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC004911.1-201ENST00000416316 871 ntBASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC006015.1-201ENST00000429970 570 ntBASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AP004607.4-201ENST00000530158 1459 ntBASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.72■■□□□ 1.39
TRAIPQ9BWF2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAIPQ9BWF2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.39
TRAIPQ9BWF2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAIPQ9BWF2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRAIPQ9BWF2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.7■■□□□ 1.38
TRAIPQ9BWF2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.7■■□□□ 1.38
TRAIPQ9BWF2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms