Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 AC005229.4-201ENST00000610085 2198 ntBASIC18.57■□□□□ 0.56
NICN1Q9BSH3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 AC009102.2-201ENST00000606772 1639 ntBASIC18.56■□□□□ 0.56
NICN1Q9BSH3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NICN1Q9BSH3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 BX664725.1-201ENST00000438252 379 ntBASIC18.55■□□□□ 0.56
NICN1Q9BSH3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NICN1Q9BSH3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NICN1Q9BSH3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 CA15P2-201ENST00000611168 834 ntBASIC18.53■□□□□ 0.56
NICN1Q9BSH3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NICN1Q9BSH3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NICN1Q9BSH3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
NICN1Q9BSH3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NICN1Q9BSH3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NICN1Q9BSH3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NICN1Q9BSH3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms