Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 AC073130.3-201ENST00000624389 2278 ntBASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CMSS1Q9BQ75 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMSS1Q9BQ75 AC004687.1-201ENST00000579003 1625 ntBASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.41■□□□□ 0.54
CMSS1Q9BQ75 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 AC010542.4-201ENST00000563151 1910 ntBASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMSS1Q9BQ75 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CMSS1Q9BQ75 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 FAM99A-202ENST00000538190 1989 ntBASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CMSS1Q9BQ75 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.38■□□□□ 0.53
CMSS1Q9BQ75 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms