Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 pRNA.5-201ENST00000612139 90 ntBASIC21.67■■□□□ 1.06
CPNE1Q99829 pRNA.11-201ENST00000618423 90 ntBASIC21.67■■□□□ 1.06
CPNE1Q99829 pRNA.13-201ENST00000619112 90 ntBASIC21.67■■□□□ 1.06
CPNE1Q99829 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE1Q99829 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE1Q99829 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE1Q99829 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE1Q99829 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CPNE1Q99829 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPNE1Q99829 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CPNE1Q99829 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CPNE1Q99829 AC006455.2-201ENST00000429931 906 ntBASIC21.66■■□□□ 1.06
CPNE1Q99829 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE1Q99829 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE1Q99829 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.66■■□□□ 1.06
CPNE1Q99829 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.66■■□□□ 1.06
CPNE1Q99829 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPNE1Q99829 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE1Q99829 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.65■■□□□ 1.06
CPNE1Q99829 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE1Q99829 AC079089.2-201ENST00000531211 1277 ntBASIC21.65■■□□□ 1.06
CPNE1Q99829 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE1Q99829 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE1Q99829 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.65■■□□□ 1.06
CPNE1Q99829 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE1Q99829 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.65■■□□□ 1.06
CPNE1Q99829 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPNE1Q99829 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CPNE1Q99829 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPNE1Q99829 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CPNE1Q99829 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.06
CPNE1Q99829 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.64■■□□□ 1.06
CPNE1Q99829 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPNE1Q99829 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPNE1Q99829 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPNE1Q99829 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE1Q99829 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.64■■□□□ 1.05
CPNE1Q99829 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.64■■□□□ 1.05
CPNE1Q99829 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE1Q99829 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPNE1Q99829 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.63■■□□□ 1.05
CPNE1Q99829 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE1Q99829 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE1Q99829 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
CPNE1Q99829 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 AL356740.2-201ENST00000601559 647 ntBASIC21.63■■□□□ 1.05
CPNE1Q99829 AC099791.2-201ENST00000605725 427 ntBASIC21.63■■□□□ 1.05
CPNE1Q99829 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE1Q99829 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.63■■□□□ 1.05
CPNE1Q99829 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CPNE1Q99829 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.63■■□□□ 1.05
CPNE1Q99829 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPNE1Q99829 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CPNE1Q99829 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.63■■□□□ 1.05
CPNE1Q99829 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE1Q99829 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE1Q99829 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE1Q99829 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.62■■□□□ 1.05
CPNE1Q99829 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.62■■□□□ 1.05
CPNE1Q99829 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.62■■□□□ 1.05
CPNE1Q99829 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE1Q99829 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPNE1Q99829 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CPNE1Q99829 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE1Q99829 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CPNE1Q99829 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE1Q99829 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CPNE1Q99829 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE1Q99829 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE1Q99829 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.61■■□□□ 1.05
CPNE1Q99829 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.61■■□□□ 1.05
CPNE1Q99829 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CPNE1Q99829 AL035685.1-201ENST00000636663 812 ntBASIC21.61■■□□□ 1.05
CPNE1Q99829 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.61■■□□□ 1.05
CPNE1Q99829 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CPNE1Q99829 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms