Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GCSHP5-201ENST00000443090 522 ntBASIC29.37■■■□□ 2.29
ABCA3Q99758 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCA3Q99758 MKRN4P-201ENST00000444706 1521 ntBASIC29.37■■■□□ 2.29
ABCA3Q99758 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA3Q99758 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC29.36■■■□□ 2.29
ABCA3Q99758 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA3Q99758 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.36■■■□□ 2.29
ABCA3Q99758 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA3Q99758 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC29.36■■■□□ 2.29
ABCA3Q99758 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC29.36■■■□□ 2.29
ABCA3Q99758 KRT18P20-201ENST00000548986 1279 ntBASIC29.36■■■□□ 2.29
ABCA3Q99758 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA3Q99758 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
ABCA3Q99758 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA3Q99758 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC29.35■■■□□ 2.29
ABCA3Q99758 ARL16-209ENST00000573715 763 ntTSL 3 BASIC29.35■■■□□ 2.29
ABCA3Q99758 ARL16-211ENST00000576135 694 ntTSL 3 BASIC29.35■■■□□ 2.29
ABCA3Q99758 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA3Q99758 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.35■■■□□ 2.29
ABCA3Q99758 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA3Q99758 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA3Q99758 DUSP8P5-201ENST00000422884 1815 ntBASIC29.35■■■□□ 2.29
ABCA3Q99758 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 KRT18P29-201ENST00000397031 1267 ntBASIC29.34■■■□□ 2.29
ABCA3Q99758 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC29.34■■■□□ 2.29
ABCA3Q99758 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 AC068338.2-201ENST00000563278 1430 ntBASIC29.34■■■□□ 2.29
ABCA3Q99758 AC055733.4-201ENST00000638462 1354 ntBASIC29.34■■■□□ 2.29
ABCA3Q99758 LINC00543-201ENST00000567234 1845 ntBASIC29.34■■■□□ 2.29
ABCA3Q99758 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC29.34■■■□□ 2.29
ABCA3Q99758 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA3Q99758 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA3Q99758 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA3Q99758 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
ABCA3Q99758 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC29.33■■■□□ 2.29
ABCA3Q99758 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC29.33■■■□□ 2.29
ABCA3Q99758 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA3Q99758 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA3Q99758 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA3Q99758 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA3Q99758 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA3Q99758 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA3Q99758 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA3Q99758 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.32■■■□□ 2.28
ABCA3Q99758 MYC-209ENST00000641252 345 ntBASIC29.32■■■□□ 2.28
ABCA3Q99758 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA3Q99758 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA3Q99758 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 ADM-205ENST00000528544 586 ntTSL 2 BASIC29.31■■■□□ 2.28
ABCA3Q99758 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC29.31■■■□□ 2.28
ABCA3Q99758 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.31■■■□□ 2.28
ABCA3Q99758 AC092118.2-201ENST00000613495 667 ntBASIC29.31■■■□□ 2.28
ABCA3Q99758 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC29.31■■■□□ 2.28
ABCA3Q99758 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA3Q99758 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
ABCA3Q99758 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA3Q99758 DUSP8P3-201ENST00000399571 1760 ntBASIC29.3■■■□□ 2.28
ABCA3Q99758 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA3Q99758 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.3■■■□□ 2.28
ABCA3Q99758 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA3Q99758 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
ABCA3Q99758 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
ABCA3Q99758 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
ABCA3Q99758 DUSP5P2-201ENST00000426873 1033 ntBASIC29.29■■■□□ 2.28
ABCA3Q99758 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA3Q99758 MIR4758-201ENST00000577688 71 ntBASIC29.29■■■□□ 2.28
ABCA3Q99758 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.29■■■□□ 2.28
ABCA3Q99758 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC29.29■■■□□ 2.28
ABCA3Q99758 AC016405.3-201ENST00000607710 860 ntBASIC29.29■■■□□ 2.28
ABCA3Q99758 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA3Q99758 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA3Q99758 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA3Q99758 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA3Q99758 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA3Q99758 MIPEPP3-201ENST00000412105 444 ntBASIC29.28■■■□□ 2.28
ABCA3Q99758 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC29.28■■■□□ 2.28
ABCA3Q99758 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
ABCA3Q99758 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
ABCA3Q99758 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC29.28■■■□□ 2.28
ABCA3Q99758 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA3Q99758 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA3Q99758 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA3Q99758 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
ABCA3Q99758 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC29.28■■■□□ 2.28
ABCA3Q99758 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA3Q99758 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC29.28■■■□□ 2.28
ABCA3Q99758 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC29.28■■■□□ 2.28
ABCA3Q99758 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA3Q99758 AC138932.3-201ENST00000567634 1902 ntBASIC29.28■■■□□ 2.28
ABCA3Q99758 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms