Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.46□□□□□ -0.09
LITAFQ99732 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
LITAFQ99732 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LITAFQ99732 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LITAFQ99732 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
LITAFQ99732 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
LITAFQ99732 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LITAFQ99732 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC14.45□□□□□ -0.1
LITAFQ99732 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.45□□□□□ -0.1
LITAFQ99732 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.45□□□□□ -0.1
LITAFQ99732 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LITAFQ99732 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LITAFQ99732 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.45□□□□□ -0.1
LITAFQ99732 CA15P2-201ENST00000611168 834 ntBASIC14.45□□□□□ -0.1
LITAFQ99732 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
LITAFQ99732 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LITAFQ99732 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LITAFQ99732 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.44□□□□□ -0.1
LITAFQ99732 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LITAFQ99732 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.44□□□□□ -0.1
LITAFQ99732 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.44□□□□□ -0.1
LITAFQ99732 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.44□□□□□ -0.1
LITAFQ99732 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.44□□□□□ -0.1
LITAFQ99732 AC087393.1-201ENST00000582896 145 ntBASIC14.44□□□□□ -0.1
LITAFQ99732 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LITAFQ99732 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.44□□□□□ -0.1
LITAFQ99732 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LITAFQ99732 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.43□□□□□ -0.1
LITAFQ99732 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.43□□□□□ -0.1
LITAFQ99732 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LITAFQ99732 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LITAFQ99732 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LITAFQ99732 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.43□□□□□ -0.1
LITAFQ99732 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LITAFQ99732 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LITAFQ99732 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LITAFQ99732 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
LITAFQ99732 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LITAFQ99732 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LITAFQ99732 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
LITAFQ99732 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.42□□□□□ -0.1
LITAFQ99732 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.42□□□□□ -0.1
LITAFQ99732 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms