Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BARD1Q99728 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BARD1Q99728 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BARD1Q99728 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BARD1Q99728 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BARD1Q99728 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BARD1Q99728 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.66■□□□□ 0.9
BARD1Q99728 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BARD1Q99728 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BARD1Q99728 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
BARD1Q99728 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BARD1Q99728 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.66■□□□□ 0.9
BARD1Q99728 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.65■□□□□ 0.9
BARD1Q99728 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.65■□□□□ 0.9
BARD1Q99728 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 AC233992.3-201ENST00000607491 485 ntBASIC20.65■□□□□ 0.9
BARD1Q99728 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BARD1Q99728 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BARD1Q99728 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BARD1Q99728 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
BARD1Q99728 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
BARD1Q99728 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BARD1Q99728 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
BARD1Q99728 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
BARD1Q99728 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.64■□□□□ 0.89
BARD1Q99728 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 BX842568.3-201ENST00000418104 571 ntBASIC20.64■□□□□ 0.89
BARD1Q99728 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.64■□□□□ 0.89
BARD1Q99728 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
BARD1Q99728 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BARD1Q99728 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.63■□□□□ 0.89
BARD1Q99728 AC080038.3-201ENST00000623346 1952 ntBASIC20.63■□□□□ 0.89
BARD1Q99728 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.63■□□□□ 0.89
BARD1Q99728 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
BARD1Q99728 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.63■□□□□ 0.89
BARD1Q99728 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BARD1Q99728 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BARD1Q99728 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.62■□□□□ 0.89
BARD1Q99728 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BARD1Q99728 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.62■□□□□ 0.89
BARD1Q99728 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BARD1Q99728 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BARD1Q99728 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
BARD1Q99728 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
BARD1Q99728 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BARD1Q99728 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
BARD1Q99728 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BARD1Q99728 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BARD1Q99728 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BARD1Q99728 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BARD1Q99728 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.61■□□□□ 0.89
BARD1Q99728 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.61■□□□□ 0.89
BARD1Q99728 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BARD1Q99728 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BARD1Q99728 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.6■□□□□ 0.89
BARD1Q99728 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
BARD1Q99728 C11orf96-202ENST00000528572 1834 ntBASIC20.6■□□□□ 0.89
BARD1Q99728 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BARD1Q99728 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BARD1Q99728 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BARD1Q99728 MIR3181-201ENST00000578512 73 ntBASIC20.6■□□□□ 0.89
BARD1Q99728 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.6■□□□□ 0.89
BARD1Q99728 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.6■□□□□ 0.89
BARD1Q99728 AL353803.4-201ENST00000565882 1934 ntBASIC20.6■□□□□ 0.89
BARD1Q99728 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.6■□□□□ 0.89
BARD1Q99728 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BARD1Q99728 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms