Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.39■■□□□ 1.17
LRRC3BQ96PB8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.39■■□□□ 1.17
LRRC3BQ96PB8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LRRC3BQ96PB8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 AL109923.1-201ENST00000618799 583 ntBASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
LRRC3BQ96PB8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 KRT87P-202ENST00000534226 1464 ntBASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC3BQ96PB8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 MIR663A-201ENST00000385250 93 ntBASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.36■■□□□ 1.17
LRRC3BQ96PB8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 AC055733.4-201ENST00000638462 1354 ntBASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC3BQ96PB8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 AL050303.2-201ENST00000619798 666 ntBASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC3BQ96PB8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 AL355802.2-201ENST00000402069 882 ntBASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.33■■□□□ 1.17
LRRC3BQ96PB8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC3BQ96PB8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC3BQ96PB8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC3BQ96PB8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 AC079089.2-201ENST00000531211 1277 ntBASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 DUX4L16-201ENST00000555130 1264 ntBASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 UBE2DNL-204ENST00000602536 740 ntBASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 LINC01960-201ENST00000563759 1884 ntBASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC3BQ96PB8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LRRC3BQ96PB8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 AP001160.3-201ENST00000601484 763 ntBASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
LRRC3BQ96PB8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms