Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASD1Q96PB1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASD1Q96PB1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASD1Q96PB1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CASD1Q96PB1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CASD1Q96PB1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.35■■□□□ 1.33
CASD1Q96PB1 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.35■■□□□ 1.33
CASD1Q96PB1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASD1Q96PB1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASD1Q96PB1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CASD1Q96PB1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
CASD1Q96PB1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.34■■□□□ 1.33
CASD1Q96PB1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CASD1Q96PB1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CASD1Q96PB1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CASD1Q96PB1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CASD1Q96PB1 MIR663A-201ENST00000385250 93 ntBASIC23.34■■□□□ 1.33
CASD1Q96PB1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.34■■□□□ 1.33
CASD1Q96PB1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.34■■□□□ 1.33
CASD1Q96PB1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CASD1Q96PB1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASD1Q96PB1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASD1Q96PB1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASD1Q96PB1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASD1Q96PB1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.33
CASD1Q96PB1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.33■■□□□ 1.33
CASD1Q96PB1 AC055733.4-201ENST00000638462 1354 ntBASIC23.33■■□□□ 1.33
CASD1Q96PB1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CASD1Q96PB1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CASD1Q96PB1 AC079089.2-201ENST00000531211 1277 ntBASIC23.33■■□□□ 1.33
CASD1Q96PB1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.33■■□□□ 1.33
CASD1Q96PB1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.33■■□□□ 1.33
CASD1Q96PB1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CASD1Q96PB1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
CASD1Q96PB1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CASD1Q96PB1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CASD1Q96PB1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
CASD1Q96PB1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.33■■□□□ 1.32
CASD1Q96PB1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CASD1Q96PB1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.32■■□□□ 1.32
CASD1Q96PB1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CASD1Q96PB1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CASD1Q96PB1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.32■■□□□ 1.32
CASD1Q96PB1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.32■■□□□ 1.32
CASD1Q96PB1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CASD1Q96PB1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASD1Q96PB1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CASD1Q96PB1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CASD1Q96PB1 AL355802.2-201ENST00000402069 882 ntBASIC23.31■■□□□ 1.32
CASD1Q96PB1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASD1Q96PB1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.31■■□□□ 1.32
CASD1Q96PB1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.31■■□□□ 1.32
CASD1Q96PB1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CASD1Q96PB1 LINC01960-201ENST00000563759 1884 ntBASIC23.3■■□□□ 1.32
CASD1Q96PB1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.3■■□□□ 1.32
CASD1Q96PB1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CASD1Q96PB1 UBE2DNL-204ENST00000602536 740 ntBASIC23.3■■□□□ 1.32
CASD1Q96PB1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CASD1Q96PB1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASD1Q96PB1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASD1Q96PB1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASD1Q96PB1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASD1Q96PB1 GPX1P1-201ENST00000388829 606 ntBASIC23.29■■□□□ 1.32
CASD1Q96PB1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 DUX4L16-201ENST00000555130 1264 ntBASIC23.29■■□□□ 1.32
CASD1Q96PB1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASD1Q96PB1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CASD1Q96PB1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.29■■□□□ 1.32
CASD1Q96PB1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CASD1Q96PB1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.28■■□□□ 1.32
CASD1Q96PB1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.28■■□□□ 1.32
CASD1Q96PB1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.28■■□□□ 1.32
CASD1Q96PB1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CASD1Q96PB1 AP001160.3-201ENST00000601484 763 ntBASIC23.28■■□□□ 1.32
CASD1Q96PB1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CASD1Q96PB1 AL050303.2-201ENST00000619798 666 ntBASIC23.28■■□□□ 1.32
CASD1Q96PB1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CASD1Q96PB1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CASD1Q96PB1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASD1Q96PB1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASD1Q96PB1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CASD1Q96PB1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CASD1Q96PB1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.27■■□□□ 1.32
CASD1Q96PB1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.27■■□□□ 1.32
CASD1Q96PB1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.27■■□□□ 1.32
CASD1Q96PB1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
CASD1Q96PB1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASD1Q96PB1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CASD1Q96PB1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms