Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 AC068587.7-201ENST00000641602 218 ntBASIC17.65■□□□□ 0.42
ZNF48Q96MX3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
ZNF48Q96MX3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF48Q96MX3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF48Q96MX3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 BX005040.4-201ENST00000637145 1518 ntBASIC17.64■□□□□ 0.41
ZNF48Q96MX3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 ID1-201ENST00000376105 1233 ntBASIC17.64■□□□□ 0.41
ZNF48Q96MX3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF48Q96MX3 AP004607.4-201ENST00000530158 1459 ntBASIC17.63■□□□□ 0.41
ZNF48Q96MX3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 AC006015.1-201ENST00000429970 570 ntBASIC17.63■□□□□ 0.41
ZNF48Q96MX3 AC010141.3-201ENST00000456659 717 ntBASIC17.63■□□□□ 0.41
ZNF48Q96MX3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 SMUG1P1-201ENST00000590640 811 ntBASIC17.63■□□□□ 0.41
ZNF48Q96MX3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 AC004854.2-201ENST00000608450 1441 ntBASIC17.63■□□□□ 0.41
ZNF48Q96MX3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF48Q96MX3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 AC137761.2-201ENST00000561729 223 ntBASIC17.62■□□□□ 0.41
ZNF48Q96MX3 AC145350.3-201ENST00000569033 163 ntBASIC17.62■□□□□ 0.41
ZNF48Q96MX3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
ZNF48Q96MX3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 AC080038.1-201ENST00000611274 1154 ntBASIC17.61■□□□□ 0.41
ZNF48Q96MX3 AC087239.1-201ENST00000622671 572 ntBASIC17.61■□□□□ 0.41
ZNF48Q96MX3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ZNF48Q96MX3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 AC016769.1-201ENST00000409132 1010 ntBASIC17.6■□□□□ 0.41
ZNF48Q96MX3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF48Q96MX3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZNF48Q96MX3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms