Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITCHQ96J02 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITCHQ96J02 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITCHQ96J02 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITCHQ96J02 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITCHQ96J02 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
ITCHQ96J02 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ITCHQ96J02 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ITCHQ96J02 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ITCHQ96J02 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ITCHQ96J02 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITCHQ96J02 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.59■□□□□ 0.89
ITCHQ96J02 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITCHQ96J02 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITCHQ96J02 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ITCHQ96J02 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITCHQ96J02 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ITCHQ96J02 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
ITCHQ96J02 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.58■□□□□ 0.89
ITCHQ96J02 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ITCHQ96J02 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITCHQ96J02 AC244015.2-201ENST00000616358 1861 ntBASIC20.58■□□□□ 0.88
ITCHQ96J02 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITCHQ96J02 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITCHQ96J02 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITCHQ96J02 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITCHQ96J02 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITCHQ96J02 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.57■□□□□ 0.88
ITCHQ96J02 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.57■□□□□ 0.88
ITCHQ96J02 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITCHQ96J02 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.57■□□□□ 0.88
ITCHQ96J02 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.57■□□□□ 0.88
ITCHQ96J02 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITCHQ96J02 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ITCHQ96J02 AL117332.1-201ENST00000622628 974 ntBASIC20.57■□□□□ 0.88
ITCHQ96J02 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
ITCHQ96J02 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITCHQ96J02 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
ITCHQ96J02 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITCHQ96J02 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
ITCHQ96J02 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.56■□□□□ 0.88
ITCHQ96J02 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.56■□□□□ 0.88
ITCHQ96J02 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.56■□□□□ 0.88
ITCHQ96J02 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ITCHQ96J02 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.56■□□□□ 0.88
ITCHQ96J02 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ITCHQ96J02 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITCHQ96J02 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
ITCHQ96J02 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.55■□□□□ 0.88
ITCHQ96J02 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.55■□□□□ 0.88
ITCHQ96J02 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ITCHQ96J02 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 RARRES2P1-201ENST00000474487 481 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 MIR6724-1-201ENST00000616420 92 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 MIR6724-2-201ENST00000616483 92 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 MIR6724-4-201ENST00000617390 92 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 MIR6724-3-201ENST00000622482 92 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 AC241377.3-202ENST00000626088 1088 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 AC241585.3-202ENST00000628937 1088 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 AC245100.8-202ENST00000629247 1058 ntBASIC20.55■□□□□ 0.88
ITCHQ96J02 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.55■□□□□ 0.88
ITCHQ96J02 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITCHQ96J02 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ITCHQ96J02 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ITCHQ96J02 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ITCHQ96J02 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.54■□□□□ 0.88
ITCHQ96J02 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITCHQ96J02 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms