Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 AC244015.2-201ENST00000616358 1861 ntBASIC19.46■□□□□ 0.71
PTP4A1Q93096 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.46■□□□□ 0.71
PTP4A1Q93096 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PTP4A1Q93096 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTP4A1Q93096 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTP4A1Q93096 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTP4A1Q93096 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.45■□□□□ 0.7
PTP4A1Q93096 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.45■□□□□ 0.7
PTP4A1Q93096 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTP4A1Q93096 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
PTP4A1Q93096 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.45■□□□□ 0.7
PTP4A1Q93096 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 AC005229.4-201ENST00000610085 2198 ntBASIC19.44■□□□□ 0.7
PTP4A1Q93096 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
PTP4A1Q93096 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTP4A1Q93096 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.43■□□□□ 0.7
PTP4A1Q93096 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.43■□□□□ 0.7
PTP4A1Q93096 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTP4A1Q93096 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.43■□□□□ 0.7
PTP4A1Q93096 AL356441.2-201ENST00000443009 864 ntBASIC19.43■□□□□ 0.7
PTP4A1Q93096 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTP4A1Q93096 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTP4A1Q93096 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A1Q93096 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTP4A1Q93096 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTP4A1Q93096 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTP4A1Q93096 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.41■□□□□ 0.7
PTP4A1Q93096 AL356740.2-201ENST00000601559 647 ntBASIC19.41■□□□□ 0.7
PTP4A1Q93096 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PTP4A1Q93096 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PTP4A1Q93096 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A1Q93096 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.41■□□□□ 0.7
PTP4A1Q93096 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.41■□□□□ 0.7
PTP4A1Q93096 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
PTP4A1Q93096 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.4■□□□□ 0.7
PTP4A1Q93096 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.4■□□□□ 0.7
PTP4A1Q93096 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.4■□□□□ 0.7
PTP4A1Q93096 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms