Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.95■■□□□ 1.9
RPGRQ92834 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.95■■□□□ 1.9
RPGRQ92834 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RPGRQ92834 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
RPGRQ92834 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.95■■□□□ 1.9
RPGRQ92834 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.95■■□□□ 1.9
RPGRQ92834 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.95■■□□□ 1.9
RPGRQ92834 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RPGRQ92834 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
RPGRQ92834 TSPY6P-201ENST00000448518 926 ntBASIC26.94■■□□□ 1.9
RPGRQ92834 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RPGRQ92834 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.93■■□□□ 1.9
RPGRQ92834 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
RPGRQ92834 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPGRQ92834 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.93■■□□□ 1.9
RPGRQ92834 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RPGRQ92834 AP001160.3-201ENST00000601484 763 ntBASIC26.93■■□□□ 1.9
RPGRQ92834 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPGRQ92834 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
RPGRQ92834 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
RPGRQ92834 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.93■■□□□ 1.9
RPGRQ92834 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RPGRQ92834 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RPGRQ92834 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RPGRQ92834 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RPGRQ92834 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.92■■□□□ 1.9
RPGRQ92834 MYCNOS-205ENST00000641950 531 ntBASIC26.92■■□□□ 1.9
RPGRQ92834 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RPGRQ92834 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RPGRQ92834 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
RPGRQ92834 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RPGRQ92834 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.92■■□□□ 1.9
RPGRQ92834 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPGRQ92834 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RPGRQ92834 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.91■■□□□ 1.9
RPGRQ92834 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
RPGRQ92834 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RPGRQ92834 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RPGRQ92834 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RPGRQ92834 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.91■■□□□ 1.9
RPGRQ92834 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RPGRQ92834 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPGRQ92834 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RPGRQ92834 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPGRQ92834 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.9■■□□□ 1.9
RPGRQ92834 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RPGRQ92834 SLC7A5P2-201ENST00000553010 536 ntBASIC26.9■■□□□ 1.9
RPGRQ92834 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPGRQ92834 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RPGRQ92834 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RPGRQ92834 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
RPGRQ92834 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.9
RPGRQ92834 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RPGRQ92834 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RPGRQ92834 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.89■■□□□ 1.9
RPGRQ92834 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RPGRQ92834 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RPGRQ92834 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.89■■□□□ 1.9
RPGRQ92834 GUSBP6-202ENST00000438529 1198 ntBASIC26.89■■□□□ 1.9
RPGRQ92834 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.89■■□□□ 1.9
RPGRQ92834 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.89■■□□□ 1.9
RPGRQ92834 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.89■■□□□ 1.9
RPGRQ92834 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
RPGRQ92834 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.89■■□□□ 1.9
RPGRQ92834 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.89■■□□□ 1.9
RPGRQ92834 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RPGRQ92834 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.89■■□□□ 1.89
RPGRQ92834 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RPGRQ92834 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
RPGRQ92834 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
RPGRQ92834 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.88■■□□□ 1.89
RPGRQ92834 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.88■■□□□ 1.89
RPGRQ92834 TSPY20P-201ENST00000450910 630 ntBASIC26.88■■□□□ 1.89
RPGRQ92834 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.88■■□□□ 1.89
RPGRQ92834 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.88■■□□□ 1.89
RPGRQ92834 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.88■■□□□ 1.89
RPGRQ92834 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.88■■□□□ 1.89
RPGRQ92834 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
RPGRQ92834 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.88■■□□□ 1.89
RPGRQ92834 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RPGRQ92834 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RPGRQ92834 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RPGRQ92834 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.88■■□□□ 1.89
RPGRQ92834 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RPGRQ92834 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RPGRQ92834 SLC29A4P1-201ENST00000398760 971 ntBASIC26.87■■□□□ 1.89
RPGRQ92834 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.87■■□□□ 1.89
RPGRQ92834 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RPGRQ92834 KRT18P6-201ENST00000555540 1265 ntBASIC26.87■■□□□ 1.89
RPGRQ92834 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.87■■□□□ 1.89
RPGRQ92834 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.87■■□□□ 1.89
RPGRQ92834 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RPGRQ92834 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RPGRQ92834 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
RPGRQ92834 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
RPGRQ92834 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RPGRQ92834 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RPGRQ92834 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RPGRQ92834 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.86■■□□□ 1.89
RPGRQ92834 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms