Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
AP3S1Q92572 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S1Q92572 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S1Q92572 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
AP3S1Q92572 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
AP3S1Q92572 AC016575.1-201ENST00000607026 382 ntBASIC19.08■□□□□ 0.64
AP3S1Q92572 AC022413.1-201ENST00000624602 984 ntBASIC19.08■□□□□ 0.64
AP3S1Q92572 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
AP3S1Q92572 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S1Q92572 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
AP3S1Q92572 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
AP3S1Q92572 AC087393.1-201ENST00000582896 145 ntBASIC19.07■□□□□ 0.64
AP3S1Q92572 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
AP3S1Q92572 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP3S1Q92572 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP3S1Q92572 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S1Q92572 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3S1Q92572 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3S1Q92572 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 AC018755.3-202ENST00000596210 929 ntBASIC19.06■□□□□ 0.64
AP3S1Q92572 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3S1Q92572 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S1Q92572 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3S1Q92572 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AP3S1Q92572 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
AP3S1Q92572 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3S1Q92572 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
AP3S1Q92572 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3S1Q92572 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
AP3S1Q92572 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.05■□□□□ 0.64
AP3S1Q92572 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S1Q92572 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
AP3S1Q92572 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 AF106564.1-201ENST00000607058 2553 ntBASIC19.04■□□□□ 0.64
AP3S1Q92572 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
AP3S1Q92572 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.04■□□□□ 0.64
AP3S1Q92572 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.04■□□□□ 0.64
AP3S1Q92572 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP3S1Q92572 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.04■□□□□ 0.64
AP3S1Q92572 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
AP3S1Q92572 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
AP3S1Q92572 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S1Q92572 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.04■□□□□ 0.64
AP3S1Q92572 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.03■□□□□ 0.64
AP3S1Q92572 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.03■□□□□ 0.64
AP3S1Q92572 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.03■□□□□ 0.64
AP3S1Q92572 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3S1Q92572 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S1Q92572 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
AP3S1Q92572 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
AP3S1Q92572 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S1Q92572 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
AP3S1Q92572 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
AP3S1Q92572 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.02■□□□□ 0.64
AP3S1Q92572 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S1Q92572 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
AP3S1Q92572 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S1Q92572 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S1Q92572 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S1Q92572 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms