Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB3IL1Q8TBN0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB3IL1Q8TBN0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB3IL1Q8TBN0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB3IL1Q8TBN0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.52■■□□□ 1.04
RAB3IL1Q8TBN0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB3IL1Q8TBN0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.52■■□□□ 1.04
RAB3IL1Q8TBN0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 AC005229.4-201ENST00000610085 2198 ntBASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 AC004987.1-201ENST00000428627 508 ntBASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RAB3IL1Q8TBN0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAB3IL1Q8TBN0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 DUX4L18-201ENST00000553347 1267 ntBASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB3IL1Q8TBN0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 SLC25A24-204ENST00000569674 2357 ntBASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 TSPY13P-201ENST00000338964 914 ntBASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 ATP5G2P3-201ENST00000429083 425 ntBASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB3IL1Q8TBN0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 BHLHE23-202ENST00000612929 1109 ntBASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB3IL1Q8TBN0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms