Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 CLDN5-201ENST00000403084 2357 ntBASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHKBP1Q8TBC3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 OXCT2P1-201ENST00000447263 1535 ntBASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 AC079834.2-201ENST00000609776 1949 ntBASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.82■■□□□ 1.24
SHKBP1Q8TBC3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 AC137761.2-201ENST00000561729 223 ntBASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 AC145350.3-201ENST00000569033 163 ntBASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.81■■□□□ 1.24
SHKBP1Q8TBC3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 ID1-201ENST00000376105 1233 ntBASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SHKBP1Q8TBC3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 AC016769.1-201ENST00000409132 1010 ntBASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 AC080038.1-201ENST00000611274 1154 ntBASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SHKBP1Q8TBC3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 DUSP8P3-201ENST00000399571 1760 ntBASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SHKBP1Q8TBC3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SHKBP1Q8TBC3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SHKBP1Q8TBC3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SHKBP1Q8TBC3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.76■■□□□ 1.23
SHKBP1Q8TBC3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms