Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 AC091305.1-201ENST00000479476 895 ntBASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 CLDN5-201ENST00000403084 2357 ntBASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.46■■□□□ 1.67
SMARCC2Q8TAQ2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.45■■□□□ 1.67
SMARCC2Q8TAQ2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMARCC2Q8TAQ2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.67
SMARCC2Q8TAQ2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMARCC2Q8TAQ2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 AC099791.1-201ENST00000416440 715 ntBASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 BX842568.3-201ENST00000418104 571 ntBASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 AC233992.3-201ENST00000607491 485 ntBASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.45■■□□□ 1.66
SMARCC2Q8TAQ2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 RASA4CP-201ENST00000424092 1398 ntBASIC25.44■■□□□ 1.66
SMARCC2Q8TAQ2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC2Q8TAQ2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMARCC2Q8TAQ2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 SLC47A1P1-202ENST00000449666 945 ntBASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 AC105265.2-201ENST00000467189 838 ntBASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.41■■□□□ 1.66
SMARCC2Q8TAQ2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 ZNRF2P3-201ENST00000424200 374 ntBASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMARCC2Q8TAQ2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC2Q8TAQ2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
SMARCC2Q8TAQ2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC2Q8TAQ2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMARCC2Q8TAQ2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.39■■□□□ 1.66
SMARCC2Q8TAQ2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.39■■□□□ 1.66
SMARCC2Q8TAQ2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SMARCC2Q8TAQ2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.39■■□□□ 1.65
SMARCC2Q8TAQ2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMARCC2Q8TAQ2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.39■■□□□ 1.65
SMARCC2Q8TAQ2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms