Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DUX4L1-201ENST00000627662 1275 ntBASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4L8-201ENST00000629013 1275 ntBASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4L3-201ENST00000630187 1275 ntBASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4L7-201ENST00000630678 1275 ntBASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4L5-201ENST00000630834 1275 ntBASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 KRT18P5-201ENST00000436075 1291 ntBASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 AC004687.1-201ENST00000579003 1625 ntBASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 AC137767.1-201ENST00000602918 1920 ntBASIC18.37■□□□□ 0.53
CLDND2Q8NHS1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 AL353803.4-201ENST00000565882 1934 ntBASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 AC105233.4-201ENST00000642045 216 ntBASIC18.36■□□□□ 0.53
CLDND2Q8NHS1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 CCDC92B-201ENST00000575506 885 ntBASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CLDND2Q8NHS1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 LINC00526-201ENST00000581067 1875 ntBASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 C1orf229-201ENST00000623686 2258 ntBASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDND2Q8NHS1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDND2Q8NHS1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDND2Q8NHS1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.33■□□□□ 0.53
CLDND2Q8NHS1 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.33■□□□□ 0.53
CLDND2Q8NHS1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CLDND2Q8NHS1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms