Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.87■■□□□ 1.89
RTL9Q8NET4 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.86■■□□□ 1.89
RTL9Q8NET4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.86■■□□□ 1.89
RTL9Q8NET4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RTL9Q8NET4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTL9Q8NET4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTL9Q8NET4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 AC055733.4-201ENST00000638462 1354 ntBASIC26.85■■□□□ 1.89
RTL9Q8NET4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTL9Q8NET4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
RTL9Q8NET4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
RTL9Q8NET4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
RTL9Q8NET4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTL9Q8NET4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.84■■□□□ 1.89
RTL9Q8NET4 BID-214ENST00000617586 542 ntTSL 5 BASIC26.84■■□□□ 1.89
RTL9Q8NET4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.83■■□□□ 1.89
RTL9Q8NET4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTL9Q8NET4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.83■■□□□ 1.89
RTL9Q8NET4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTL9Q8NET4 KRT18P11-201ENST00000435214 1283 ntBASIC26.83■■□□□ 1.88
RTL9Q8NET4 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.83■■□□□ 1.88
RTL9Q8NET4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
RTL9Q8NET4 AC104771.1-201ENST00000603335 964 ntBASIC26.83■■□□□ 1.88
RTL9Q8NET4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.88
RTL9Q8NET4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
RTL9Q8NET4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RTL9Q8NET4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RTL9Q8NET4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RTL9Q8NET4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
RTL9Q8NET4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.82■■□□□ 1.88
RTL9Q8NET4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RTL9Q8NET4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.82■■□□□ 1.88
RTL9Q8NET4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
RTL9Q8NET4 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.82■■□□□ 1.88
RTL9Q8NET4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.82■■□□□ 1.88
RTL9Q8NET4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.82■■□□□ 1.88
RTL9Q8NET4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.81■■□□□ 1.88
RTL9Q8NET4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTL9Q8NET4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RTL9Q8NET4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.81■■□□□ 1.88
RTL9Q8NET4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.81■■□□□ 1.88
RTL9Q8NET4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.81■■□□□ 1.88
RTL9Q8NET4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTL9Q8NET4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
RTL9Q8NET4 CROCCP5-201ENST00000436658 830 ntBASIC26.81■■□□□ 1.88
RTL9Q8NET4 AC026185.1-201ENST00000445748 174 ntBASIC26.81■■□□□ 1.88
RTL9Q8NET4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.81■■□□□ 1.88
RTL9Q8NET4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTL9Q8NET4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTL9Q8NET4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTL9Q8NET4 AC093323.1-202ENST00000635031 2045 ntBASIC26.8■■□□□ 1.88
RTL9Q8NET4 ESRRAP2-201ENST00000418437 1549 ntBASIC26.8■■□□□ 1.88
RTL9Q8NET4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.8■■□□□ 1.88
RTL9Q8NET4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RTL9Q8NET4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.8■■□□□ 1.88
RTL9Q8NET4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.8■■□□□ 1.88
RTL9Q8NET4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RTL9Q8NET4 DUSP8P5-201ENST00000422884 1815 ntBASIC26.79■■□□□ 1.88
RTL9Q8NET4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.79■■□□□ 1.88
RTL9Q8NET4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTL9Q8NET4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
RTL9Q8NET4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.79■■□□□ 1.88
RTL9Q8NET4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
RTL9Q8NET4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RTL9Q8NET4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.78■■□□□ 1.88
RTL9Q8NET4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
RTL9Q8NET4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
RTL9Q8NET4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTL9Q8NET4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTL9Q8NET4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTL9Q8NET4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.78■■□□□ 1.88
RTL9Q8NET4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTL9Q8NET4 AC104187.1-201ENST00000607510 612 ntBASIC26.78■■□□□ 1.88
RTL9Q8NET4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.78■■□□□ 1.88
RTL9Q8NET4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTL9Q8NET4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTL9Q8NET4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms