Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 AC139530.1-201ENST00000575312 1977 ntBASIC18.95■□□□□ 0.62
CPEB3Q8NE35 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 MIR638-201ENST00000385237 100 ntBASIC18.95■□□□□ 0.62
CPEB3Q8NE35 AC010141.3-201ENST00000456659 717 ntBASIC18.95■□□□□ 0.62
CPEB3Q8NE35 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 AC005837.3-201ENST00000612163 286 ntBASIC18.95■□□□□ 0.62
CPEB3Q8NE35 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPEB3Q8NE35 EP400NL-214ENST00000641289 2402 ntBASIC18.94■□□□□ 0.62
CPEB3Q8NE35 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 AC087239.1-201ENST00000622671 572 ntBASIC18.94■□□□□ 0.62
CPEB3Q8NE35 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPEB3Q8NE35 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 RASA4CP-201ENST00000424092 1398 ntBASIC18.93■□□□□ 0.62
CPEB3Q8NE35 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 ECEL1P1-201ENST00000373592 1742 ntBASIC18.93■□□□□ 0.62
CPEB3Q8NE35 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPEB3Q8NE35 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 AC091305.1-201ENST00000479476 895 ntBASIC18.92■□□□□ 0.62
CPEB3Q8NE35 AC079089.2-201ENST00000531211 1277 ntBASIC18.92■□□□□ 0.62
CPEB3Q8NE35 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPEB3Q8NE35 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 OXCT2P1-201ENST00000447263 1535 ntBASIC18.91■□□□□ 0.62
CPEB3Q8NE35 LINC00526-201ENST00000581067 1875 ntBASIC18.91■□□□□ 0.62
CPEB3Q8NE35 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.91■□□□□ 0.62
CPEB3Q8NE35 AC142381.2-201ENST00000566120 298 ntBASIC18.91■□□□□ 0.62
CPEB3Q8NE35 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPEB3Q8NE35 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
CPEB3Q8NE35 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.89■□□□□ 0.62
CPEB3Q8NE35 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPEB3Q8NE35 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CPEB3Q8NE35 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CPEB3Q8NE35 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPEB3Q8NE35 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms