Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC011298.3-201ENST00000615796 283 ntBASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CPNE9Q8IYJ1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 AC008406.3-201ENST00000620001 1374 ntBASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.43■■□□□ 1.02
CPNE9Q8IYJ1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 C11orf96-202ENST00000528572 1834 ntBASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.42■■□□□ 1.02
CPNE9Q8IYJ1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 UNC93B3-201ENST00000308076 687 ntBASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.41■■□□□ 1.02
CPNE9Q8IYJ1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CPNE9Q8IYJ1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CPNE9Q8IYJ1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE9Q8IYJ1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms