Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC034268.1-201ENST00000441047 882 ntBASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM48Q8IWZ4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 LINC02228-203ENST00000641970 1355 ntBASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM48Q8IWZ4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM48Q8IWZ4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 AL162430.1-201ENST00000480705 870 ntBASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM48Q8IWZ4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 AC104564.3-201ENST00000582367 638 ntBASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM48Q8IWZ4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM48Q8IWZ4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM48Q8IWZ4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 CLDN5-201ENST00000403084 2357 ntBASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms