Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 UBE2DNL-204ENST00000602536 740 ntBASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 AL121832.2-201ENST00000610979 668 ntBASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.44■■□□□ 1.34
NPAS4Q8IUM7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 ABHD17AP1-201ENST00000358206 933 ntBASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 DUX4L16-201ENST00000555130 1264 ntBASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 AL050303.2-201ENST00000619798 666 ntBASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
NPAS4Q8IUM7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
NPAS4Q8IUM7 ANOS2P-203ENST00000472227 1816 ntBASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 AC007322.1-201ENST00000426983 750 ntBASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 AC142086.2-201ENST00000569753 217 ntBASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 AP001160.3-201ENST00000601484 763 ntBASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPAS4Q8IUM7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 AC055733.4-201ENST00000638462 1354 ntBASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 MYCNOS-205ENST00000641950 531 ntBASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NPAS4Q8IUM7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NPAS4Q8IUM7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NPAS4Q8IUM7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NPAS4Q8IUM7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.39■■□□□ 1.34
NPAS4Q8IUM7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NPAS4Q8IUM7 AC083906.2-201ENST00000511578 360 ntBASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 AC005181.1-201ENST00000604782 1256 ntBASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 AC092068.2-201ENST00000590491 1708 ntBASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPAS4Q8IUM7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 AC079089.2-201ENST00000531211 1277 ntBASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NPAS4Q8IUM7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 TSPY6P-201ENST00000448518 926 ntBASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms