Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SYVN1Q86TM6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.31■■□□□ 1
SYVN1Q86TM6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.31■■□□□ 1
SYVN1Q86TM6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
SYVN1Q86TM6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.31■■□□□ 1
SYVN1Q86TM6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SYVN1Q86TM6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SYVN1Q86TM6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.3■■□□□ 1
SYVN1Q86TM6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 CA15P2-201ENST00000611168 834 ntBASIC21.3■■□□□ 1
SYVN1Q86TM6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.3■■□□□ 1
SYVN1Q86TM6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.3■■□□□ 1
SYVN1Q86TM6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYVN1Q86TM6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.29■■□□□ 1
SYVN1Q86TM6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.29■■□□□ 1
SYVN1Q86TM6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.29■■□□□ 1
SYVN1Q86TM6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.29■■□□□ 1
SYVN1Q86TM6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SYVN1Q86TM6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.29■■□□□ 1
SYVN1Q86TM6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYVN1Q86TM6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SYVN1Q86TM6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SYVN1Q86TM6 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.28■■□□□ 1
SYVN1Q86TM6 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.28■■□□□ 1
SYVN1Q86TM6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.28■■□□□ 1
SYVN1Q86TM6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.27■■□□□ 1
SYVN1Q86TM6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.27■■□□□ 1
SYVN1Q86TM6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.27■■□□□ 1
SYVN1Q86TM6 AC136469.2-201ENST00000623944 1028 ntBASIC21.27■■□□□ 1
SYVN1Q86TM6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SYVN1Q86TM6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.27■■□□□ 1
SYVN1Q86TM6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.27■■□□□ 1
SYVN1Q86TM6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SYVN1Q86TM6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SYVN1Q86TM6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.27■□□□□ 0.99
SYVN1Q86TM6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SYVN1Q86TM6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SYVN1Q86TM6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 AC007375.3-201ENST00000600936 2314 ntBASIC21.26■□□□□ 0.99
SYVN1Q86TM6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SYVN1Q86TM6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 AC008764.7-201ENST00000593779 1081 ntBASIC21.25■□□□□ 0.99
SYVN1Q86TM6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 AC092666.2-201ENST00000613287 246 ntBASIC21.25■□□□□ 0.99
SYVN1Q86TM6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYVN1Q86TM6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
SYVN1Q86TM6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.23■□□□□ 0.99
SYVN1Q86TM6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SYVN1Q86TM6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms