Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF180Q86T96 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF180Q86T96 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF180Q86T96 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF180Q86T96 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF180Q86T96 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RNF180Q86T96 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF180Q86T96 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RNF180Q86T96 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RNF180Q86T96 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
RNF180Q86T96 AC073210.2-201ENST00000430369 194 ntBASIC24.22■■□□□ 1.47
RNF180Q86T96 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
RNF180Q86T96 MIR4651-201ENST00000582622 73 ntBASIC24.22■■□□□ 1.47
RNF180Q86T96 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF180Q86T96 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF180Q86T96 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF180Q86T96 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF180Q86T96 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
RNF180Q86T96 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF180Q86T96 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RNF180Q86T96 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
RNF180Q86T96 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF180Q86T96 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF180Q86T96 AC133552.2-202ENST00000575694 574 ntBASIC24.21■■□□□ 1.47
RNF180Q86T96 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF180Q86T96 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF180Q86T96 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
RNF180Q86T96 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
RNF180Q86T96 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.2■■□□□ 1.46
RNF180Q86T96 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF180Q86T96 AC105036.2-201ENST00000569468 176 ntBASIC24.2■■□□□ 1.46
RNF180Q86T96 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF180Q86T96 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF180Q86T96 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF180Q86T96 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF180Q86T96 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF180Q86T96 AL139125.2-201ENST00000623134 1869 ntBASIC24.19■■□□□ 1.46
RNF180Q86T96 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF180Q86T96 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF180Q86T96 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF180Q86T96 CNN2P6-201ENST00000439038 900 ntBASIC24.19■■□□□ 1.46
RNF180Q86T96 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.19■■□□□ 1.46
RNF180Q86T96 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.19■■□□□ 1.46
RNF180Q86T96 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.19■■□□□ 1.46
RNF180Q86T96 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF180Q86T96 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF180Q86T96 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF180Q86T96 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF180Q86T96 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF180Q86T96 LINC01124-201ENST00000409786 2117 ntBASIC24.19■■□□□ 1.46
RNF180Q86T96 AC004812.2-201ENST00000611079 2094 ntBASIC24.19■■□□□ 1.46
RNF180Q86T96 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF180Q86T96 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF180Q86T96 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF180Q86T96 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF180Q86T96 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF180Q86T96 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF180Q86T96 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF180Q86T96 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RNF180Q86T96 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF180Q86T96 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF180Q86T96 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF180Q86T96 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF180Q86T96 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF180Q86T96 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
RNF180Q86T96 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF180Q86T96 KRT18P20-201ENST00000548986 1279 ntBASIC24.17■■□□□ 1.46
RNF180Q86T96 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
RNF180Q86T96 AC010536.3-201ENST00000620306 533 ntBASIC24.17■■□□□ 1.46
RNF180Q86T96 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
RNF180Q86T96 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
RNF180Q86T96 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF180Q86T96 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
RNF180Q86T96 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
RNF180Q86T96 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF180Q86T96 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.17■■□□□ 1.46
RNF180Q86T96 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF180Q86T96 AC055733.4-201ENST00000638462 1354 ntBASIC24.16■■□□□ 1.46
RNF180Q86T96 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF180Q86T96 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF180Q86T96 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF180Q86T96 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF180Q86T96 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF180Q86T96 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF180Q86T96 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF180Q86T96 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF180Q86T96 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF180Q86T96 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF180Q86T96 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RNF180Q86T96 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
RNF180Q86T96 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.15■■□□□ 1.46
RNF180Q86T96 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF180Q86T96 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF180Q86T96 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.14■■□□□ 1.46
RNF180Q86T96 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF180Q86T96 AC010141.2-201ENST00000452426 721 ntBASIC24.14■■□□□ 1.45
RNF180Q86T96 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.14■■□□□ 1.45
RNF180Q86T96 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF180Q86T96 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RNF180Q86T96 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms