Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LYSMD3Q7Z3D4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD3Q7Z3D4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD3Q7Z3D4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD3Q7Z3D4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.77■■□□□ 1.08
LYSMD3Q7Z3D4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD3Q7Z3D4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD3Q7Z3D4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LYSMD3Q7Z3D4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 GUSBP5-202ENST00000510805 1989 ntBASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 AC079089.2-201ENST00000531211 1277 ntBASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 AC139530.1-201ENST00000575312 1977 ntBASIC21.76■■□□□ 1.07
LYSMD3Q7Z3D4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.75■■□□□ 1.07
LYSMD3Q7Z3D4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD3Q7Z3D4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD3Q7Z3D4 LINC00526-201ENST00000581067 1875 ntBASIC21.73■■□□□ 1.07
LYSMD3Q7Z3D4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD3Q7Z3D4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD3Q7Z3D4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD3Q7Z3D4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD3Q7Z3D4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 MIR572-201ENST00000384983 95 ntBASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms