Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP1BQ7LBR1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP1BQ7LBR1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP1BQ7LBR1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP1BQ7LBR1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP1BQ7LBR1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP1BQ7LBR1 OR2I1P-207ENST00000453522 948 ntBASIC19.83■□□□□ 0.77
CHMP1BQ7LBR1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP1BQ7LBR1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP1BQ7LBR1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP1BQ7LBR1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CHMP1BQ7LBR1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP1BQ7LBR1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 AC004687.1-201ENST00000579003 1625 ntBASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP1BQ7LBR1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 ANOS2P-203ENST00000472227 1816 ntBASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 IRS3P-201ENST00000223076 1006 ntBASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP1BQ7LBR1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP1BQ7LBR1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms