Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 AL050303.2-201ENST00000619798 666 ntBASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00336Q6ZUF6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 KRT18P29-201ENST00000397031 1267 ntBASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 GUSBP6-202ENST00000438529 1198 ntBASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 AC010141.3-201ENST00000456659 717 ntBASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 ITM2C-210ENST00000620962 501 ntBASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 AP006294.2-201ENST00000641667 209 ntBASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00336Q6ZUF6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 POU5F1P3-201ENST00000428824 1078 ntBASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 AF201337.1-201ENST00000520239 748 ntBASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 MIR4651-201ENST00000582622 73 ntBASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00336Q6ZUF6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00336Q6ZUF6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 SMUG1P1-201ENST00000590640 811 ntBASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00336Q6ZUF6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 KRT87P-202ENST00000534226 1464 ntBASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 MIR4758-201ENST00000577688 71 ntBASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00336Q6ZUF6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms