Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.74■□□□□ 0.59
C11orf88Q6PI97 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf88Q6PI97 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 AC011551.1-201ENST00000614101 683 ntBASIC18.73■□□□□ 0.59
C11orf88Q6PI97 AC073130.3-201ENST00000624389 2278 ntBASIC18.73■□□□□ 0.59
C11orf88Q6PI97 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf88Q6PI97 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 AC120024.1-201ENST00000562672 995 ntBASIC18.72■□□□□ 0.59
C11orf88Q6PI97 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf88Q6PI97 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 AIRN-201ENST00000601203 4374 ntBASIC18.71■□□□□ 0.59
C11orf88Q6PI97 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
C11orf88Q6PI97 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 AC139530.1-201ENST00000575312 1977 ntBASIC18.7■□□□□ 0.58
C11orf88Q6PI97 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf88Q6PI97 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.69■□□□□ 0.58
C11orf88Q6PI97 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms