Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.69■□□□□ 0.74
NIPAL3Q6P499 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPAL3Q6P499 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.68■□□□□ 0.74
NIPAL3Q6P499 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 AL499627.2-201ENST00000606283 725 ntBASIC19.68■□□□□ 0.74
NIPAL3Q6P499 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
NIPAL3Q6P499 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPAL3Q6P499 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 AC010542.4-201ENST00000563151 1910 ntBASIC19.66■□□□□ 0.74
NIPAL3Q6P499 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 AC004687.1-201ENST00000579003 1625 ntBASIC19.66■□□□□ 0.74
NIPAL3Q6P499 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 SERBP1P1-201ENST00000396021 1160 ntBASIC19.66■□□□□ 0.74
NIPAL3Q6P499 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 MIR3181-201ENST00000578512 73 ntBASIC19.66■□□□□ 0.74
NIPAL3Q6P499 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NIPAL3Q6P499 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 AC133637.1-201ENST00000624115 1537 ntBASIC19.65■□□□□ 0.74
NIPAL3Q6P499 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPAL3Q6P499 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NIPAL3Q6P499 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.64■□□□□ 0.74
NIPAL3Q6P499 UNC93B3-201ENST00000308076 687 ntBASIC19.64■□□□□ 0.73
NIPAL3Q6P499 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 FAM99A-202ENST00000538190 1989 ntBASIC19.64■□□□□ 0.73
NIPAL3Q6P499 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPAL3Q6P499 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms