Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 MIR572-201ENST00000384983 95 ntBASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39BQ5VTQ0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 AC010141.3-201ENST00000456659 717 ntBASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39BQ5VTQ0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39BQ5VTQ0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39BQ5VTQ0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC39BQ5VTQ0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39BQ5VTQ0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC39BQ5VTQ0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39BQ5VTQ0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 AC242852.2-201ENST00000615738 1807 ntBASIC22.52■■□□□ 1.2
TTC39BQ5VTQ0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
TTC39BQ5VTQ0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 AL358852.1-201ENST00000623174 1268 ntBASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39BQ5VTQ0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 MIR935-201ENST00000401179 91 ntBASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 AL354811.1-201ENST00000610286 706 ntBASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC39BQ5VTQ0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 LINC01960-201ENST00000563759 1884 ntBASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 AC137767.1-201ENST00000602918 1920 ntBASIC22.49■■□□□ 1.19
TTC39BQ5VTQ0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39BQ5VTQ0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39BQ5VTQ0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39BQ5VTQ0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
TTC39BQ5VTQ0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39BQ5VTQ0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms