Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC013268.1-206ENST00000638368 961 ntBASIC36.04■■■■□ 3.36
SNAPC4Q5SXM2 AC112229.1-201ENST00000639295 961 ntBASIC36.04■■■■□ 3.36
SNAPC4Q5SXM2 AC009237.3-201ENST00000393279 1427 ntBASIC36.03■■■■□ 3.36
SNAPC4Q5SXM2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC36.03■■■■□ 3.36
SNAPC4Q5SXM2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
SNAPC4Q5SXM2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC36.03■■■■□ 3.36
SNAPC4Q5SXM2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
SNAPC4Q5SXM2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC36.03■■■■□ 3.36
SNAPC4Q5SXM2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
SNAPC4Q5SXM2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC36.02■■■■□ 3.36
SNAPC4Q5SXM2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
SNAPC4Q5SXM2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
SNAPC4Q5SXM2 MYC-209ENST00000641252 345 ntBASIC36.01■■■■□ 3.36
SNAPC4Q5SXM2 AP006294.2-201ENST00000641667 209 ntBASIC36.01■■■■□ 3.36
SNAPC4Q5SXM2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.35
SNAPC4Q5SXM2 AC068338.2-201ENST00000563278 1430 ntBASIC36■■■■□ 3.35
SNAPC4Q5SXM2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC36■■■■□ 3.35
SNAPC4Q5SXM2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
SNAPC4Q5SXM2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
SNAPC4Q5SXM2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 AC079630.1-202ENST00000618127 1840 ntBASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
SNAPC4Q5SXM2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC35.98■■■■□ 3.35
SNAPC4Q5SXM2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
SNAPC4Q5SXM2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
SNAPC4Q5SXM2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC35.98■■■■□ 3.35
SNAPC4Q5SXM2 AC093787.1-201ENST00000450396 207 ntBASIC35.98■■■■□ 3.35
SNAPC4Q5SXM2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
SNAPC4Q5SXM2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC35.97■■■■□ 3.35
SNAPC4Q5SXM2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
SNAPC4Q5SXM2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC35.96■■■■□ 3.35
SNAPC4Q5SXM2 ESRRAP1-201ENST00000400596 1257 ntBASIC35.95■■■■□ 3.35
SNAPC4Q5SXM2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC35.95■■■■□ 3.35
SNAPC4Q5SXM2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC35.95■■■■□ 3.35
SNAPC4Q5SXM2 AC007322.4-201ENST00000509611 723 ntBASIC35.95■■■■□ 3.35
SNAPC4Q5SXM2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
SNAPC4Q5SXM2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC35.95■■■■□ 3.34
SNAPC4Q5SXM2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC35.95■■■■□ 3.34
SNAPC4Q5SXM2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
SNAPC4Q5SXM2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SNAPC4Q5SXM2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SNAPC4Q5SXM2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC35.94■■■■□ 3.34
SNAPC4Q5SXM2 AC138907.5-202ENST00000569484 235 ntBASIC35.94■■■■□ 3.34
SNAPC4Q5SXM2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SNAPC4Q5SXM2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 AL158047.1-201ENST00000445918 881 ntBASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC35.93■■■■□ 3.34
SNAPC4Q5SXM2 KRT18P20-201ENST00000548986 1279 ntBASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 AC055733.4-201ENST00000638462 1354 ntBASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC35.92■■■■□ 3.34
SNAPC4Q5SXM2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 RPS2P4-201ENST00000476944 856 ntBASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC35.91■■■■□ 3.34
SNAPC4Q5SXM2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC35.9■■■■□ 3.34
SNAPC4Q5SXM2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
SNAPC4Q5SXM2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC35.9■■■■□ 3.34
SNAPC4Q5SXM2 AC016405.3-201ENST00000607710 860 ntBASIC35.9■■■■□ 3.34
SNAPC4Q5SXM2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC35.9■■■■□ 3.34
SNAPC4Q5SXM2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
SNAPC4Q5SXM2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
SNAPC4Q5SXM2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC35.89■■■■□ 3.34
SNAPC4Q5SXM2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
SNAPC4Q5SXM2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC35.89■■■■□ 3.34
SNAPC4Q5SXM2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC35.89■■■■□ 3.34
SNAPC4Q5SXM2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC35.88■■■■□ 3.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms