Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC009237.3-201ENST00000393279 1427 ntBASIC23.06■■□□□ 1.28
VARS2Q5ST30 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.05■■□□□ 1.28
VARS2Q5ST30 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VARS2Q5ST30 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VARS2Q5ST30 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
VARS2Q5ST30 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.05■■□□□ 1.28
VARS2Q5ST30 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VARS2Q5ST30 AC016769.1-201ENST00000409132 1010 ntBASIC23.05■■□□□ 1.28
VARS2Q5ST30 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
VARS2Q5ST30 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
VARS2Q5ST30 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VARS2Q5ST30 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VARS2Q5ST30 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VARS2Q5ST30 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VARS2Q5ST30 KRT19P1-201ENST00000405746 1186 ntBASIC23.04■■□□□ 1.28
VARS2Q5ST30 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VARS2Q5ST30 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.04■■□□□ 1.28
VARS2Q5ST30 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VARS2Q5ST30 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VARS2Q5ST30 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.03■■□□□ 1.28
VARS2Q5ST30 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VARS2Q5ST30 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VARS2Q5ST30 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VARS2Q5ST30 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
VARS2Q5ST30 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VARS2Q5ST30 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.01■■□□□ 1.27
VARS2Q5ST30 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VARS2Q5ST30 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23■■□□□ 1.27
VARS2Q5ST30 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23■■□□□ 1.27
VARS2Q5ST30 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VARS2Q5ST30 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
VARS2Q5ST30 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
VARS2Q5ST30 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23■■□□□ 1.27
VARS2Q5ST30 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
VARS2Q5ST30 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23■■□□□ 1.27
VARS2Q5ST30 AC080038.1-201ENST00000611274 1154 ntBASIC23■■□□□ 1.27
VARS2Q5ST30 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
VARS2Q5ST30 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23■■□□□ 1.27
VARS2Q5ST30 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
VARS2Q5ST30 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.99■■□□□ 1.27
VARS2Q5ST30 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VARS2Q5ST30 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VARS2Q5ST30 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.99■■□□□ 1.27
VARS2Q5ST30 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.99■■□□□ 1.27
VARS2Q5ST30 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VARS2Q5ST30 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
VARS2Q5ST30 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.99■■□□□ 1.27
VARS2Q5ST30 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VARS2Q5ST30 DUSP8P5-201ENST00000422884 1815 ntBASIC22.98■■□□□ 1.27
VARS2Q5ST30 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.98■■□□□ 1.27
VARS2Q5ST30 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.98■■□□□ 1.27
VARS2Q5ST30 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
VARS2Q5ST30 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.98■■□□□ 1.27
VARS2Q5ST30 KRT87P-202ENST00000534226 1464 ntBASIC22.98■■□□□ 1.27
VARS2Q5ST30 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
VARS2Q5ST30 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
VARS2Q5ST30 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms