Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D28Q2M2D7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D28Q2M2D7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 AC137767.1-201ENST00000602918 1920 ntBASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 PKD1P6-201ENST00000343738 4769 ntBASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 AC133561.1-201ENST00000568600 2415 ntBASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 OR7E47P-201ENST00000546390 1422 ntBASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 MIR572-201ENST00000384983 95 ntBASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 AC139530.1-201ENST00000575312 1977 ntBASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 GUSBP5-202ENST00000510805 1989 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 IRS3P-201ENST00000223076 1006 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 AC105233.4-201ENST00000642045 216 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 AC242852.2-201ENST00000615738 1807 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms