Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D28Q2M2D7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D28Q2M2D7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 AC137767.1-201ENST00000602918 1920 ntBASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 PKD1P6-201ENST00000343738 4769 ntBASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.83■□□□□ 0.6
TBC1D28Q2M2D7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 AC133561.1-201ENST00000568600 2415 ntBASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D28Q2M2D7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 OR7E47P-201ENST00000546390 1422 ntBASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D28Q2M2D7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 MIR572-201ENST00000384983 95 ntBASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 AC139530.1-201ENST00000575312 1977 ntBASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D28Q2M2D7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 GUSBP5-202ENST00000510805 1989 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 IRS3P-201ENST00000223076 1006 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 AC105233.4-201ENST00000642045 216 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 AC242852.2-201ENST00000615738 1807 ntBASIC18.79■□□□□ 0.6
TBC1D28Q2M2D7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D28Q2M2D7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms