Protein–RNA interactions for Protein: Q12071

VPS54, Vacuolar protein sorting-associated protein 54, yeastyeast

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS54Q12071 AIM6YDL237W 1173 nt3.92□□□□□ -1.78
VPS54Q12071 YDR336WYDR336W 945 nt3.92□□□□□ -1.78
VPS54Q12071 YOS1YER074W-A 258 nt3.92□□□□□ -1.78
VPS54Q12071 FMP10YER182W 735 nt3.92□□□□□ -1.78
VPS54Q12071 OTU1YFL044C 906 nt3.92□□□□□ -1.78
VPS54Q12071 KEG1YFR042W 603 nt3.92□□□□□ -1.78
VPS54Q12071 MPC1YGL080W 393 nt3.92□□□□□ -1.78
VPS54Q12071 RPS0AYGR214W 759 nt3.92□□□□□ -1.78
VPS54Q12071 YLR156WYLR156W 345 nt3.92□□□□□ -1.78
VPS54Q12071 YLR159WYLR159W 345 nt3.92□□□□□ -1.78
VPS54Q12071 YLR161WYLR161W 345 nt3.92□□□□□ -1.78
VPS54Q12071 TEX1YNL253W 1269 nt3.92□□□□□ -1.78
VPS54Q12071 YOR338WYOR338W 1092 nt3.92□□□□□ -1.78
VPS54Q12071 YCL001W-AYCL001W-A 462 nt3.92□□□□□ -1.78
VPS54Q12071 PRP3YDR473C 1410 nt3.92□□□□□ -1.78
VPS54Q12071 KRE5YOR336W 4098 nt3.92□□□□□ -1.78
VPS54Q12071 RRP8YDR083W 1179 nt3.91□□□□□ -1.78
VPS54Q12071 TOS8YGL096W 831 nt3.91□□□□□ -1.78
VPS54Q12071 TAF6YGL112C 1551 nt3.91□□□□□ -1.78
VPS54Q12071 COX2Q0250 756 nt3.91□□□□□ -1.78
VPS54Q12071 PSY3YLR376C 729 nt3.91□□□□□ -1.78
VPS54Q12071 COQ5YML110C 924 nt3.91□□□□□ -1.78
VPS54Q12071 ARG80YMR042W 534 nt3.91□□□□□ -1.78
VPS54Q12071 RUF21RUF21 707 nt3.91□□□□□ -1.78
VPS54Q12071 YNL162W-AYNL162W-A 219 nt3.91□□□□□ -1.78
VPS54Q12071 VPS27YNR006W 1869 nt3.91□□□□□ -1.78
VPS54Q12071 REX4YOL080C 870 nt3.91□□□□□ -1.78
VPS54Q12071 YOL166CYOL166C 339 nt3.91□□□□□ -1.78
VPS54Q12071 YOR186WYOR186W 435 nt3.91□□□□□ -1.78
VPS54Q12071 UAF30YOR295W 687 nt3.91□□□□□ -1.78
VPS54Q12071 MCM7YBR202W 2538 nt3.91□□□□□ -1.78
VPS54Q12071 ERG5YMR015C 1617 nt3.91□□□□□ -1.78
VPS54Q12071 IPI3YNL182C 1668 nt3.9□□□□□ -1.78
VPS54Q12071 YTM1YOR272W 1383 nt3.9□□□□□ -1.78
VPS54Q12071 FAT1YBR041W 2010 nt3.9□□□□□ -1.78
VPS54Q12071 YKR015CYKR015C 1707 nt3.9□□□□□ -1.78
VPS54Q12071 COP1YDL145C 3606 nt3.9□□□□□ -1.79
VPS54Q12071 HAT2YEL056W 1206 nt3.9□□□□□ -1.79
VPS54Q12071 RTA1YGR213C 954 nt3.9□□□□□ -1.79
VPS54Q12071 IMP3YHR148W 552 nt3.9□□□□□ -1.79
VPS54Q12071 EBP2YKL172W 1284 nt3.9□□□□□ -1.79
VPS54Q12071 IES3YLR052W 753 nt3.9□□□□□ -1.79
VPS54Q12071 URA4YLR420W 1095 nt3.9□□□□□ -1.79
VPS54Q12071 IST1YNL265C 897 nt3.9□□□□□ -1.79
VPS54Q12071 YNR071CYNR071C 1029 nt3.9□□□□□ -1.79
VPS54Q12071 MCM16YPR046W 546 nt3.9□□□□□ -1.79
VPS54Q12071 KAR5YMR065W 1515 nt3.9□□□□□ -1.79
VPS54Q12071 EMC1YCL045C 2283 nt3.9□□□□□ -1.79
VPS54Q12071 YDR271CYDR271C 372 nt3.89□□□□□ -1.79
VPS54Q12071 YER034WYER034W 558 nt3.89□□□□□ -1.79
VPS54Q12071 YJR112W-AYJR112W-A 330 nt3.89□□□□□ -1.79
VPS54Q12071 ABP140YOR239W 1887 nt3.89□□□□□ -1.79
VPS54Q12071 NAT1YDL040C 2565 nt3.89□□□□□ -1.79
VPS54Q12071 FMP25YLR077W 1752 nt3.89□□□□□ -1.79
VPS54Q12071 RPB2YOR151C 3675 nt3.89□□□□□ -1.79
VPS54Q12071 HAP4YKL109W 1665 nt3.88□□□□□ -1.79
VPS54Q12071 SGN1YIR001C 753 nt3.88□□□□□ -1.79
VPS54Q12071 HMX1YLR205C 954 nt3.88□□□□□ -1.79
VPS54Q12071 CLG1YGL215W 1359 nt3.88□□□□□ -1.79
VPS54Q12071 TRE2YOR256C 2430 nt3.87□□□□□ -1.79
VPS54Q12071 YVC1YOR087W 2028 nt3.87□□□□□ -1.79
VPS54Q12071 YCR015CYCR015C 954 nt3.87□□□□□ -1.79
VPS54Q12071 REC104YHR157W 549 nt3.87□□□□□ -1.79
VPS54Q12071 RPB3YIL021W 957 nt3.87□□□□□ -1.79
VPS54Q12071 CAB2YIL083C 1098 nt3.87□□□□□ -1.79
VPS54Q12071 COX19YLL018C-A 297 nt3.87□□□□□ -1.79
VPS54Q12071 RPS10BYMR230W 318 nt3.87□□□□□ -1.79
VPS54Q12071 MDJ2YNL328C 441 nt3.87□□□□□ -1.79
VPS54Q12071 MGA1YGR249W 1371 nt3.87□□□□□ -1.79
VPS54Q12071 ERB1YMR049C 2424 nt3.86□□□□□ -1.79
VPS54Q12071 NUP85YJR042W 2235 nt3.86□□□□□ -1.79
VPS54Q12071 DHR2YKL078W 2208 nt3.86□□□□□ -1.79
VPS54Q12071 YDL071CYDL071C 375 nt3.86□□□□□ -1.79
VPS54Q12071 PCL2YDL127W 927 nt3.86□□□□□ -1.79
VPS54Q12071 OKP1YGR179C 1221 nt3.86□□□□□ -1.79
VPS54Q12071 YKE4YIL023C 1041 nt3.86□□□□□ -1.79
VPS54Q12071 TIF34YMR146C 1044 nt3.86□□□□□ -1.79
VPS54Q12071 UTP23YOR004W 765 nt3.86□□□□□ -1.79
VPS54Q12071 ISW2YOR304W 3363 nt3.86□□□□□ -1.79
VPS54Q12071 GAC1YOR178C 2382 nt3.85□□□□□ -1.79
VPS54Q12071 CHD1YER164W 4407 nt3.85□□□□□ -1.79
VPS54Q12071 RPS14AYCR031C 414 nt3.85□□□□□ -1.79
VPS54Q12071 YER076CYER076C 909 nt3.85□□□□□ -1.79
VPS54Q12071 IDP2YLR174W 1239 nt3.85□□□□□ -1.79
VPS54Q12071 YLR444CYLR444C 303 nt3.85□□□□□ -1.79
VPS54Q12071 YMR306C-AYMR306C-A 390 nt3.85□□□□□ -1.79
VPS54Q12071 POF1YCL047C 777 nt3.85□□□□□ -1.79
VPS54Q12071 KTR6YPL053C 1341 nt3.85□□□□□ -1.79
VPS54Q12071 IOC2YLR095C 2439 nt3.85□□□□□ -1.79
VPS54Q12071 MLH2YLR035C 2088 nt3.85□□□□□ -1.79
VPS54Q12071 FLO10YKR102W 3510 nt3.84□□□□□ -1.79
VPS54Q12071 MTD1YKR080W 963 nt3.84□□□□□ -1.79
VPS54Q12071 OSW1YOR255W 837 nt3.84□□□□□ -1.79
VPS54Q12071 YPR142CYPR142C 564 nt3.84□□□□□ -1.79
VPS54Q12071 FYV5YCL058C 459 nt3.84□□□□□ -1.79
VPS54Q12071 CIT1YNR001C 1440 nt3.84□□□□□ -1.79
VPS54Q12071 ACA1YER045C 1470 nt3.84□□□□□ -1.8
VPS54Q12071 SPT16YGL207W 3108 nt3.84□□□□□ -1.8
VPS54Q12071 TCB3YML072C 4638 nt3.83□□□□□ -1.8
VPS54Q12071 GRX3YDR098C 858 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms