Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 KAR4YCL055W 1008 nt4.23□□□□□ -1.73
RKR1Q04781 HOF1YMR032W 2010 nt4.23□□□□□ -1.73
RKR1Q04781 SLP1YOR154W 1764 nt4.22□□□□□ -1.73
RKR1Q04781 PTI1YGR156W 1278 nt4.22□□□□□ -1.73
RKR1Q04781 YKL169CYKL169C 384 nt4.22□□□□□ -1.73
RKR1Q04781 GAT2YMR136W 1683 nt4.21□□□□□ -1.73
RKR1Q04781 MSE1YOL033W 1611 nt4.21□□□□□ -1.74
RKR1Q04781 KRS1YDR037W 1776 nt4.21□□□□□ -1.74
RKR1Q04781 YIL102C-AYIL102C-A 228 nt4.21□□□□□ -1.74
RKR1Q04781 BEM4YPL161C 1902 nt4.21□□□□□ -1.74
RKR1Q04781 RPL33AYPL143W 324 nt4.2□□□□□ -1.74
RKR1Q04781 MDM38YOL027C 1722 nt4.2□□□□□ -1.74
RKR1Q04781 MDM34YGL219C 1380 nt4.2□□□□□ -1.74
RKR1Q04781 PRE2YPR103W 864 nt4.19□□□□□ -1.74
RKR1Q04781 TFC4YGR047C 3078 nt4.19□□□□□ -1.74
RKR1Q04781 YJL132WYJL132W 2253 nt4.19□□□□□ -1.74
RKR1Q04781 GIN4YDR507C 3429 nt4.19□□□□□ -1.74
RKR1Q04781 KRI1YNL308C 1776 nt4.19□□□□□ -1.74
RKR1Q04781 SPT4YGR063C 309 nt4.19□□□□□ -1.74
RKR1Q04781 PMR1YGL167C 2853 nt4.18□□□□□ -1.74
RKR1Q04781 NFT1YKR103W 3657 nt4.18□□□□□ -1.74
RKR1Q04781 PRM15YMR278W 1869 nt4.18□□□□□ -1.74
RKR1Q04781 VTC3YPL019C 2508 nt4.18□□□□□ -1.74
RKR1Q04781 YHR213WYHR213W 597 nt4.18□□□□□ -1.74
RKR1Q04781 YAR062WYAR062W 597 nt4.18□□□□□ -1.74
RKR1Q04781 YMR082CYMR082C 357 nt4.18□□□□□ -1.74
RKR1Q04781 FUN12YAL035W 3009 nt4.18□□□□□ -1.74
RKR1Q04781 SEC26YDR238C 2922 nt4.17□□□□□ -1.74
RKR1Q04781 RTT10YPL183C 3042 nt4.17□□□□□ -1.74
RKR1Q04781 GRE3YHR104W 984 nt4.17□□□□□ -1.74
RKR1Q04781 YKR033CYKR033C 426 nt4.17□□□□□ -1.74
RKR1Q04781 RPO21YDL140C 5202 nt4.17□□□□□ -1.74
RKR1Q04781 REV3YPL167C 4515 nt4.16□□□□□ -1.74
RKR1Q04781 BCK1YJL095W 4437 nt4.16□□□□□ -1.74
RKR1Q04781 DSD1YGL196W 1287 nt4.16□□□□□ -1.74
RKR1Q04781 YLR347W-AYLR347W-A 141 nt4.16□□□□□ -1.74
RKR1Q04781 DIM1YPL266W 957 nt4.16□□□□□ -1.74
RKR1Q04781 GUF1YLR289W 1938 nt4.16□□□□□ -1.74
RKR1Q04781 YJR037WYJR037W 384 nt4.15□□□□□ -1.74
RKR1Q04781 PHD1YKL043W 1101 nt4.15□□□□□ -1.74
RKR1Q04781 STP4YDL048C 1473 nt4.15□□□□□ -1.75
RKR1Q04781 Q0182Q0182 405 nt4.14□□□□□ -1.75
RKR1Q04781 DGA1YOR245C 1257 nt4.14□□□□□ -1.75
RKR1Q04781 TYR1YBR166C 1359 nt4.14□□□□□ -1.75
RKR1Q04781 TDA11YHR159W 1515 nt4.14□□□□□ -1.75
RKR1Q04781 KAP123YER110C 3342 nt4.14□□□□□ -1.75
RKR1Q04781 PAU14YIL176C 363 nt4.14□□□□□ -1.75
RKR1Q04781 RPS22AYJL190C 393 nt4.14□□□□□ -1.75
RKR1Q04781 PAU1YJL223C 363 nt4.14□□□□□ -1.75
RKR1Q04781 BET3YKR068C 582 nt4.14□□□□□ -1.75
RKR1Q04781 ATG21YPL100W 1491 nt4.14□□□□□ -1.75
RKR1Q04781 NPR3YHL023C 3441 nt4.13□□□□□ -1.75
RKR1Q04781 SCP160YJL080C 3669 nt4.13□□□□□ -1.75
RKR1Q04781 YFR006WYFR006W 1608 nt4.13□□□□□ -1.75
RKR1Q04781 SSQ1YLR369W 1974 nt4.13□□□□□ -1.75
RKR1Q04781 RPL13BYMR142C 600 nt4.13□□□□□ -1.75
RKR1Q04781 YBR242WYBR242W 717 nt4.13□□□□□ -1.75
RKR1Q04781 HOS3YPL116W 2094 nt4.12□□□□□ -1.75
RKR1Q04781 PRP22YER013W 3438 nt4.12□□□□□ -1.75
RKR1Q04781 PTR2YKR093W 1806 nt4.11□□□□□ -1.75
RKR1Q04781 YPT35YHR105W 645 nt4.1□□□□□ -1.75
RKR1Q04781 YDL241WYDL241W 372 nt4.1□□□□□ -1.75
RKR1Q04781 PHM6YDR281C 315 nt4.1□□□□□ -1.75
RKR1Q04781 RRT13YER066W 558 nt4.1□□□□□ -1.75
RKR1Q04781 PDE1YGL248W 1110 nt4.1□□□□□ -1.75
RKR1Q04781 AYR1YIL124W 894 nt4.1□□□□□ -1.75
RKR1Q04781 PAU17YLL025W 375 nt4.1□□□□□ -1.75
RKR1Q04781 YLR036CYLR036C 612 nt4.1□□□□□ -1.75
RKR1Q04781 APL6YGR261C 2430 nt4.09□□□□□ -1.75
RKR1Q04781 GRX6YDL010W 696 nt4.09□□□□□ -1.75
RKR1Q04781 YDR491CYDR491C 492 nt4.09□□□□□ -1.75
RKR1Q04781 AAD16YFL057C 459 nt4.09□□□□□ -1.75
RKR1Q04781 PPA2YMR267W 933 nt4.09□□□□□ -1.75
RKR1Q04781 MCA1YOR197W 1299 nt4.09□□□□□ -1.75
RKR1Q04781 AFT1YGL071W 2073 nt4.08□□□□□ -1.76
RKR1Q04781 IOC2YLR095C 2439 nt4.08□□□□□ -1.76
RKR1Q04781 VTC1YER072W 390 nt4.08□□□□□ -1.76
RKR1Q04781 YIL163CYIL163C 354 nt4.08□□□□□ -1.76
RKR1Q04781 YOR050CYOR050C 348 nt4.08□□□□□ -1.76
RKR1Q04781 YPL107WYPL107W 747 nt4.08□□□□□ -1.76
RKR1Q04781 RIB5YBR256C 717 nt4.08□□□□□ -1.76
RKR1Q04781 PUT3YKL015W 2940 nt4.08□□□□□ -1.76
RKR1Q04781 PDR5YOR153W 4536 nt4.08□□□□□ -1.76
RKR1Q04781 GPI19YDR437W 423 nt4.07□□□□□ -1.76
RKR1Q04781 RBL2YOR265W 321 nt4.07□□□□□ -1.76
RKR1Q04781 YBR141W-AYBR141W-A 96 nt4.07□□□□□ -1.76
RKR1Q04781 FLO9YAL063C 3969 nt4.07□□□□□ -1.76
RKR1Q04781 YLR152CYLR152C 1731 nt4.07□□□□□ -1.76
RKR1Q04781 MAK32YCR019W 1092 nt4.06□□□□□ -1.76
RKR1Q04781 YGR121W-AYGR121W-A 216 nt4.06□□□□□ -1.76
RKR1Q04781 RPB8YOR224C 441 nt4.06□□□□□ -1.76
RKR1Q04781 AXL1YPR122W 3627 nt4.06□□□□□ -1.76
RKR1Q04781 ULP1YPL020C 1866 nt4.06□□□□□ -1.76
RKR1Q04781 SWR1YDR334W 4545 nt4.06□□□□□ -1.76
RKR1Q04781 NGL3YML118W 1518 nt4.05□□□□□ -1.76
RKR1Q04781 IZH3YLR023C 1632 nt4.05□□□□□ -1.76
RKR1Q04781 ERG11YHR007C 1593 nt4.05□□□□□ -1.76
RKR1Q04781 SEO1YAL067C 1782 nt4.05□□□□□ -1.76
RKR1Q04781 RSM10YDR041W 612 nt4.04□□□□□ -1.76
RKR1Q04781 SFH5YJL145W 885 nt4.04□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 36.8 ms